Data visualisation for mass spectrometry labelling experiments¶
Welcome to isoplot’s documentation!¶
Isoplot is a software for the visualisation of MS data from C13 labelling experiments. It takes as input corrected MS data from IsoCor in csv or tsv format. Isoplot outputs static and interactive plots that are then used for quality assessment, biological interpretation, project reports, published papers and so forth.
It is one of the routine tools used on the MetaToul platform.
The code is open-source, and available on GitHub under a GPLv3 license .
Key Features
Creation of static and interactive plots (barplot, heatmap, clustermap, etc…)
Command-line interface
Jupyter Notebook graphical interface using ipywidgets
Open-source, free and easy to install everywhere where Python 3 is available
Biologist-friendly
The documentation relative to Isoplot’s installation and usage can be found on ReadTheDocs.
Usage